Workshop: Enhancing PDB Deposition and Validation Practices
Join the RAD Collaboratory and the RCSB PDB at Rutgers for a hands-on workshop for depositors at all stages of PDB data submission on Thursday, May 8, 2025.
Attendees will become proficient in leveraging various OneDep features and tools, including ORCiD management, validating data, submitting batches of structures, and completing depositions with minimal manual input.
Registration: Click here to register
Agenda:
1:00pm: Preparing PDBx/mmCIF files; validating structures before deposition; and OneDep overview
2:00pm: Tutorial 1: Prepare, validate, and correct errors
3:00pm: Coffee Break
3:15pm: Tutorial 2: Making OneDep easy: ORCiD features, checking sequences and ligands, reviewing validation
4:30pm: Discussion: Share your stories (all participants); One-on-one help provided where possible.
5:30pm: Conclusion and Acknowledgements
Time & Location:
- Date: Thursday, May 8, 2025
- Time: 1:00 pm – 5:30 pm
- Location: Room 120, Institute for Quantitative Biomedicine (building labeled Proteomics).
Parking:
- Rutgers Students, Staff, and Faculty: Please adhere to parking permit restrictions. Faculty and staff with valid permits may park in the Faculty and Staff lots across campus. Please adhere to parking permit restrictions. Faculty and staff with valid permits may park in the Faculty & Staff lots across all campuses.
- Lot 58: 165 Bevier Rd, Piscataway, NJ 08854
- Lots A, B, and C: 679 Hoes Lane West, Piscataway, NJ 08854
- Participants not affiliated with Rutgers: Please contact the IQB Building Manager, Hank Wojciechowski, at henry.wojciechowski@rutgers.edu with the following information: License State; License Number; Make; Model; Year; Color; and Registered Owner of Vehicle. Parking for participants not affiliated with Rutgers will be available in Lots A, B, and C (Address: 679 Hoes Lane West, Piscataway, NJ 08854). Important Reminder: Please adhere to parking lot signage, as an ePermit does not override signage such as “guaranteed” or “reserved” parking.
Rutgers Bus System: If you’re using the Rutgers bus system, the Alison Road Classroom (ARC) Building/Science Buildings bus stop is a short walk to IQB. The C, REXB, B, A, H, and BL bus routes all stop at ARC.
Questions: Contact info@rcsb.org.
